Hi
I am trying to analyse some MeDIP-seq data using MEDIPS. I would like to perform differential methylation analysis between controls...
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MEDIPS DMR identification
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ssDNA library prep for meDIP
Hi everyone, I am working on meDIP-seq using antibody that recognizes methylated cytosines to pull down methylated regions in the genome.
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Normalize coverage in Meth-Seq data
Hello all,
I am a total noob in analyzing NGS data, and I would really appreciate if I can get help with my prob. Also, kindly excuse me...
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Relative methylation density / composition plot
I have MeDIP-seq data on two different cell lines. I'd like to produce a figure like figure 3a from this paper, showing the relative amount of methylation...
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meDIP-chip/meDIP-seq/MethylCap-seq using mouse DNA
Hi all,
I am begining to analyse global methylation using my balb/c mice DNA.
I have been looking into some techniques...
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Methylation Analysis
What is the best option for methylation analysis at this point? We would like to analyze methylation in mouse liver samples and are considering all options:...
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Can Chromasig be used to analyse multiple DNA methylation samples?
As described in the paper, we've analysed our chip-seq data successfully. But i wonder if it could be used for DNA methylation (MeDIP-seq) samples. We're...
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Illumina Primers
Hi everyone,
I am new to the SEQanswers community and have been searching through
the threads to find primer and adapter concentrations...