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Haumich started a topic deNovo/merged genome to big

in De novo discovery

01-06-2016, 07:24 AM
deNovo/merged genome to big

Hello Everyone,

in my project, I deNovo-assembled a genome of a non-model rodent using "Abyss". I now have various scaffolds, which...

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Last edited by Haumich; 01-09-2016, 10:38 PM.
Nordic started a topic Best methods for merging heterozygous contigs?

in Bioinformatics

11-18-2014, 02:28 AM
Best methods for merging heterozygous contigs?

Greetings!

I'm dealing with an assembly from a diploid organism and am in the process of reducing it to a haploid assembly as much as I...

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Last edited by Nordic; 11-18-2014, 03:04 AM.
RamakrishnanRS started a topic Oases assembly merge times out on a cluster

in Bioinformatics

06-10-2013, 04:41 PM
Oases assembly merge times out on a cluster

Hi,

I have run velvet-oases on k-mers 21 thru 55, and I am trying to merge the assemblies now. I tried using the velveth --> velvetg...

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