Search Result - SEQanswers

You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion

Search Results: 4 results in 0.0030 seconds.

R.66 started a topic how to extract gene name for non-synonymous SNPs from annotated vcf file for GO analy

in Bioinformatics

07-21-2017, 02:34 AM
how to extract gene name for non-synonymous SNPs from annotated vcf file for GO analy

hi everyone

i have an annotated vcf file (using snpEff) and now i want to extract gene names for non-synonymous SNPs and then do GO analysis...

See more | Go to post
rezakhalkhali started a topic how to extract gene name for non-synonymous SNPs from annotated vcf file for GO analy

in Bioinformatics

07-21-2017, 01:56 AM
how to extract gene name for non-synonymous SNPs from annotated vcf file for GO analy

1111111111111111

See more | Go to post

Last edited by rezakhalkhali; 07-21-2017, 02:30 AM.
vitor started a topic Calculating dN/dS with NGS data

in Illumina (Solexa)

07-17-2015, 08:37 AM
Calculating dN/dS with NGS data

Hello,

I have DNA reads mapped in the genome reference in the format .SAM, i need to calculate dN/dS in each ORF.
How can I calculate...

See more | Go to post
Darth Ghisus started a topic Nucleotide to amino acid translation + synonymous/non-synonymous count

in Bioinformatics

09-03-2012, 07:11 AM
Nucleotide to amino acid translation + synonymous/non-synonymous count

Hi everybody,

I'm going to perform a SNP calling using SAMtools.
The source data consist of an invertebrate mitochondrial transcriptome...

See more | Go to post

Previous template Next

Working...