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log normalization of RPKM values in voom
I have a question about using voom() on TPM (or RPKM) values. I have TPM values on gene level for 200 samples, and I want to use voom() function to log-normalize...
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abnormal length distribution of small RNA data
Hi everyone,
I have six libraries of small RNA sequences from illumina platform, among them 5 show normal length distribution (24nt sRNAs...Last edited by leejimmy93; 08-19-2014, 06:58 PM.
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Normalizing microRNA seq data
Hi there,
I'm trying to find out what is an acceptable way of normalizing microRNA deep sequencing data.
We have a number...
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normalizing RNA-seq data to "unique transcript length" instead of "transcript length"
I've clustered expression profiles from 20 experiments for a large group of highly related genes. I have the raw read counts and normalized this data...