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mcduryea started a topic Oases pipeline fails on second kmer

in De novo discovery

02-01-2016, 06:23 AM
Oases pipeline fails on second kmer

Hello all,

I am hoping for help running the oases_pipeline.py. I am able to run the pipeline for a subset of my data and for 4 Kmer values...

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Lagartixa started a topic Oases questions

in RNA Sequencing

05-23-2014, 09:19 AM
Oases questions

Hello people!

I am doing a de novo transcriptome assembly and after reading the literature I went for Oases. Even though it seemed to give...

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JakeBuehler started a topic Oases python script can't find Velvet

in De novo discovery

04-26-2014, 09:56 PM
Oases python script can't find Velvet

Aloha,

So, I'm trying to run Oases to create a de novo transcriptome. I have the paired-end reads file ready to go, and the newest versions...

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InesSoriguer started a topic Error running oases_pipeline python script

in Illumina (Solexa)

09-27-2012, 10:32 AM
Error running oases_pipeline python script

Hello!

I'm very new in the world of bioinformatics, and maybe my question is so simple.

I'm trying to run the python script...

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