I am running RepeatMasker v4.0.5
the command line is :
RepeatMasker -lib my_own_lib.fasta -dir output_directory output_name...
5 results in 0.0028 seconds.
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RepeatMasker v4.0.5 no output created
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nested for loop to concatenate fastq files
My pooled PE RNA-Seq data was demultiplexed by the sequencing facility, so the data I receive is a directory with sub directories for each sample that... -
Velvet/Oases short1_nb?
Both Velvet and Oases stats.txt files include a final column called short1_nb. I'm getting numbers here, but can't find any explanation for them All example... -
outputs from TGICL/CAP3
Hello everyone,
I think I have a problem with TGICL/CAP3 because I don't have any '.ace' file in my outputs.
I run this... -
Output of HTseq-count?
Hi Everyone,
I'm trying my hands at HTseq-count and was able to run it on our university cluster. We're using version htseq/0.4.6p1. My input command...
