Hey guys,
im relatively new to the subject and coundnt find a proper answer to my question in the internet yet... :/
I am currently trying...
8 results in 0.0021 seconds.
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Meaning of the P-value relating to SNP (single nucleotide polymorphism)
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VarScan2. Strange behaviour of somatic-p-value
Hi community of SEQanswers,
I'm running varscan2 for somatic mutation calling following the commands of its documentation: mpileup + varscan...Last edited by slois; 04-03-2014, 08:01 AM. -
Cuffdiff q-values
I am having problem understanding the Cuffdiff q-values. I am using Cufdiff v.2.1.1 and I understand that in this version the lowest possible p-value... -
Are Cuffdiff q-values and p-values reliable when multiple treatments are analyzed?
Does anyone know if the q- and p-values output by CuffDiff are reliable when more than two treatments are compared in the the analysis.
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pattern of p-values for DE testing for RNA-Seq data
I have a very general question on roughly checking the results of DE tests for RNA-Seq data.
After a proper comparison of a control and... -
PhyloP P-value precision
Hi everyone!
I am using PhyloP to compute p-values. I was wondering if anyone knew how to change the precision (i.e. give me 10 digits... -
Deseq : p-val & p-adj variation BUT foldchange CONSTANT
Hi everybody !
This is my first post here, even if i'm a frequent seqanswers reader, and this time, I didn't found any answer to... -
DESeq - sharing mode question, and an odd p-value distribution
I have a couple of questions about DESeq (and my particular analysis)
1) I have a data set with three controls and three treated samples....
