I am working on structural alignment of PDB files, using Python, Bio.pdb parser. Code works well, and I get output.
I am reading more on RMSD...
7 results in 0.0028 seconds.
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Finding distance from superimposed PDBs
Hi Members,
How do I get distance between pdb atoms of 2 files, after they are super imposed?
...Code:def alignPDB_file(refPDB, samplePDB):
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Doubt for PDB and chains
Hello Members,
I am working on PDB files, extracting sequences, visualize them in tools, align using PDB files.
I have few doubts... -
Download fasta file for pdb id from uniprot
Hi Members,
I've a list of pdb id [some ~80].
I want to download their fasta file from Uniprot.
I have been unable to find... -
Multiple chains in fasta file from PDB
Hi members,
I donwloaded fasta file for 1F88 pdb id.
I found that it has 2 sequence ids in it. One for Chain A and other B. I aligned... -
pdb files for c. elegans
Hi Members,
Pardon me if this thread is not in correct forum and the question is too silly.
I am working on certain set of transmembrane... -
Software for Site Directed Mutagenesis (In silico)
I am looking for a good tool for examining the effects of mutations in proteins. In particular, one that shows the effects of the mutated residues on...
