Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • bio_informatics
    Senior Member
    • Nov 2013
    • 182

    #1

    Doubt for PDB and chains

    Hello Members,
    I am working on PDB files, extracting sequences, visualize them in tools, align using PDB files.

    I have few doubts on PDB:
    - Sometimes PDB file contains multiple chains.
    Why there are multiple chains? Do all chains combine and give the resultant protein? Or each individual chain represents the same protein.

    - I get ligand information in PDB, and if I have multiple chains. To which does it bind?
    Does it bind to all chains?

    Thanks in advance.
    Bioinformaticscally calm
  • bio_informatics
    Senior Member
    • Nov 2013
    • 182

    #2
    *bounce*. Please help members.
    Bioinformaticscally calm

    Comment

    • GenoMax
      Senior Member
      • Feb 2008
      • 7142

      #3
      This page should help: http://www.rcsb.org/pdb/101/static10..._tutorial.html

      Comment

      • bio_informatics
        Senior Member
        • Nov 2013
        • 182

        #4
        That helps and clears many clouds.
        Thank you GenoMax.
        Bioinformaticscally calm

        Comment

        Latest Articles

        Collapse

        • SEQadmin2
          Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
          by SEQadmin2



          Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

          Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
          ...
          10-14-2026, 09:55 AM
        • SEQadmin2
          New Genomics Technologies Take Aim at Long-Standing Limits
          by SEQadmin2


          Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

          We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing
          ...
          09-28-2026, 10:25 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by SEQadmin2, Yesterday, 11:13 AM
        0 responses
        19 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, Yesterday, 10:48 AM
        0 responses
        18 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-15-2026, 10:52 AM
        0 responses
        36 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-14-2026, 05:39 AM
        0 responses
        42 views
        0 reactions
        Last Post SEQadmin2  
        Working...