Hello,
I'm posting this hoping that you can help me understanding 3 unusual Tapestation Profiles. These profiles correspond to (DNA) libraries...
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Extract the coordinates of the gaps between peaks.
Hi everybody, i'm new in SeQanswers.
I have some sequencing data from GEO repository it is written like this:
chr1 1 ...
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[Announcement] Testers needed for new peak annotation tool
Hi,
I am developing a new c++ based open-source tool (peak-tool) to annotate peaks from a bed file using gencode annotation database. ...Last edited by amitra; 05-07-2015, 01:46 PM.
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Using MACS for histone marks with GLOBAL lambda
Hello everyone!
We are trying to use MACS for detecting enriched regions in a histone modification ChIPSeq experiment. I know that MACS...
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MACS peaks
Hi,
Am using MACS for the first time. I ran MACS on my sequence data and I find peaks (as listed in the bed file) in regions that have...
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ChIPseq - Mathematical model for TF binding sites
Hello Seq community,
Does anyone have some source of information about modelling or identifying Transcription factor binding sites (enriched...