12 results in 0.0021 seconds.
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Seeking workflow for phage-display library sequence results
I have a dataset of Nanopore sequencing results from a phage-display library. I'm not finding any good hits for a pre-existing workflow or best practices... -
How to conduct raxmlHPC analysis?
Hi all, I need to conduct evolutionary analysis by raxmlHPC, wherein I have to to follow the model as given below,
I have...Last edited by dineshkumarsrk; 03-23-2019, 03:42 AM. -
PhD position computational biology - Massively Parallel Phylogeny Reconstruction
Note: This opportunity is only open to UK nationals (or EU students who have been resident in the UK for 3+ years immediately prior to the programme start... -
Consensus tree with missing data
Hi,
I have a phylogenetic trees built from alignments of sequences of a set of genes (1 gene per tree), where the final nodes are the individual... -
Phylogeny using whole proteomes
Dear all,
I have the proteome (and genome) of several species of nematodes. I would like to build the phylogeny of these species. Ultimately... -
Problems with the nexus format and generating a phylogeny
I have 5 nuclear de novos and I was attempting to build a phylogeny out of them, but I'm running into a brick wall. I was initially trying to use MrBayes,... -
choice of a phylogeny tree mode
Hi,
I wonder what would be the best choice for the mode of a large phylogeny tree (hundreds of leaves) to identify clusters and to view and print... -
Best classifier for viral reads--PhyloSift? BLAST? Others?
I'm trying to compare methods of classifying RNA and DNA virus reads from metagenomic sequeincing data. I've got MetAMOS set up, and I'm mainly interested... -
Synthetic data generator
HI all,
I would like to know whether I can generate some synthetic subpopulation human data from a given reference with the exact error... -
Sequence based clustering to divide into groups
Hello All,
I have a set of ~1000 sequences, they are of different length, minimum being 500nt. I want separate them into groups on the... -
Most straightforward way to prepare input files for PhyloCSF (rat rn4)?
Core question: I did a de novo transcriptome assembly with cufflinks for rat based on RNA-Seq data. There are a couple of 1000 transcripts not overlapping... -
How to collapse sequences excluding sequencing artifacts? (454)
Hi all,
I'm begginer in the next generation sequencing and recently I got my first data. I have some issues with them because there is just one...
