11 results in 0.0030 seconds.
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hope to know the softwares to plot this image about genomic linkage map
I would like to know the softwares they used to plot such images in figure 1 and figure2. http://www.nature.com/ng/journal/v45...l/ng.2472.html (The... -
not memory size enough
Hi everybody, I need help with my big plot. I couldn't see my plot because an error appeared:
Error: cannot allocate vector of size 6.9 Gb
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Mapping SNPs to Chromosomes
I have a reference genome (.fa) and its annotation (.gtf) files. I have sequenced both DNA and RNA from test sample and generated vcf files containing... -
How to plot each ChIPseq peak ??
Dear all,
I have ChIP-seq data now and trying to make plot for each peak. I have .bam file and peak regions. how can I make coverage plot (RPKM)... -
Plotting in R
Hi Everyone,
I am trying to plot a histogram in R using this command which is serving my purpose
x <- read.table(file="cov.txt",header...Last edited by aevgup; 04-25-2014, 10:41 AM. -
how to visulize gene synteny alignment
Hi,
Is there anyone can tell me some easy tools that can visulize/plot gene synteny alignment as the picture attached?
Thank...Last edited by NGS group; 10-16-2013, 04:47 AM. -
Plotting per chromosome coverage for BAM files
Hi,
I wish to plot coverage profiles for each of the chromosomes from my BAM files which I obtained after aligning exome sequencing data... -
Percent/Fraction/Number of Bases vs. Read Depth plots - How to generate ?
Hi,
I wish to generate a percentage of bases vs. read depth plot for my data. An example of such a plot (Figure 1B) is here in the following... -
Trouble with box-plot of quality data in SOLID
hi everyone,
I have used the SOLiD2std.pl to change the csfasta and qual files to standard fastq files.
I then ran fastqc to view boxplots... -
FASTX quality plot error
Hi all,
I am using FASTX tool kit to for the quality control. When I run fastq_quality_boxplot_graph.sh script on the quality stats file, I get... -
1st cycle report
Hi,
The Solexa first cycle report gives numbers as the cluster count per lane, Intensity and Std dev of A C G Ts, some focus metrics and...
