17 results in 0.0029 seconds.
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Optimizing a ddRADSeq study with a large genome
I am designing a study to investigate the population genetic structure of an endangered species. We've decided to go the ddRADSeq route, and I have a... -
Novice help: ddRAD for population genetics
Hi all,
We're working with the plant genus Diascia. There's no reference genome, and there isn't data on the overall genome size. We want... -
Where to get Population RNA-seq Data??
Hi Everyone,
I was wondering if anybody knows databases where I can get population specific RNA-seq data. I know that Geuvadis has a collection... -
read groups
This is a problem for which there are many posts already. Yet having spent two days googling my problems, and having them unresolved, I am going to ask....Last edited by sasignor; 01-07-2014, 01:24 PM. -
Permutation Strategies for RAD population genomics
I have a set of RAD data sampled from many individuals from several populations and I would like to calculate various population genetics statistics continuously... -
Post-doc Imperial College (insect vector population biology/genetics)
Hello,
We have a job vacancy - here are the first two paragraphs:
https://www4.ad.ic.ac.uk/OA_HTML/OA.j... -
Trinity paralog filtering
(cross-posted on BioStars: http://www.biostars.org/p/76694/)
Greetings Everyone,
I am working with a group that does population... -
Consensus sequence out of BAM+VCF with low coverage areas masked?
Hello!
I'm wondering if it's possible to create a consensus sequence that combines the data of BAM/SAM files and filtered VCF files so... -
PhD position in bacterial experimental genomics
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PhD position in bacterial experimental and genomic evolution
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dn/ds genome-wide
Hi all,
I have assembled a de novo transcriptome for my organism of interest (in this case, the eastern oyster). The genome of a related species... -
Population genetics software/tools -NGS data
Any good population genetics software/tools to handle NGS data. It would be nice if it should accepts any of alignment files like bam, sam, mpileup or... -
How many individuals per population?
G'day Everyone,
I wasn't sure where to post this question; my apologies if I'm in the wrong spot.
I recently read this paper... -
VCF to pseudo BAM
I've an odd question.
I'm working with a set of VCF files from multiple individuals in a population. However, there are a number of tools for population... -
Howdy!
Greetings from Texas. I'm a PhD candidate in the field of evolutionary genetics, and I am here to do some population genomics with Illumina HiSeq data.... -
popbam or similar software?
I am wondering if anyone has tried popbam? I am looking for software to conduct population-level analyses, e.g., to compute nucleotide diversity, SNPs,...
