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Calculate Genotype Likelihood from raw data
I am working on amplicon data from an aploid genome (same length, already aligned with a miltiple alignment). Since I cannot generate a .bam file I've...
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Illumina Raw data
Hello.
Are there raw data databases for Illumina Sequencers for development and testing preliminary image analysis procedures?
Thanks
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PacBio raw .bam file
I have just received data from my first PacBio sequencing operation and was unaware that the new output format was in .bam file for raw reads, as they...
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Hello!!(and help)
Hi everyone !!
I'm a bioinformatic student from Barcelona, I'm trying to download rna-seq raw data of Camponotus castaneus but I can not find anything...
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Determine similarity from NGS data
Hi,
I have 250bp paired-end sequencing data (Illumina MiSeq, k-mer coverage ~18) of four E. coli strains. What I want to determine is how...
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Raw 16S Metagenomic data
I have dual indices paired end sequences in separate fastq.gz files.
Using EDAMAME's tutorial of using pandaseq I was able to join the paired end....
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SRA format file. How to use it?
I downloaded a sequencing proyect from SRA and I downloaded a ile which contains a lot of information of raw reads. My problem starts when I try to use...