Dear all,
I ran an alignment of Sequel data using blasr. Now I want to get some metrics about the sam file using samstat 1.5.1 (running on Ubuntu...
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problem with samstat on PacBio alignment
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Single position mismatch agglomerate after alignment
Hello folks,
After downloading and realigning the reads of the ChIP-seq sample GSM721212 with bwa, I get a quite strange mismatch profile...
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Samstat error message
I have mapped the reads (Illumina Hiseq) using STAR aligner and I am using Samstat for assessing the quality of the mapping.
1. The samstat...