Hello all,
I ran the following command to call variants in a given region of interest of a DNA sequnce:
./samtools-0.1.18/samtools mpileup...
3 results in 0.0029 seconds.
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Error while calling variants using samtools
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Finding reads shared between 2 bam files
Hi
I have mapped bisulfite converted HiSeq reads separately to in silico converted forward & reverse strands so have files
...Code:sample.forward.bam
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mpileup on 300 BAM files
I have seen similar posts on this forum, but I continue getting "segmentation fault" every time I start mpileup on my BAM files. I have about...Last edited by tejajo; 07-08-2013, 02:33 AM.
