Hi,
I am doing de novo assembly for mitochondrial genome for that after being used Velvet and Amos(minimus2), I have got more of singletons...
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Singletons in De novo assembly
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Singletons, unique genes... outputs from velvet
Hi,
I have used the Velvet and Oases for alignment of the raw reads, however, I couldn't find in the output files some important data, such as...
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singletons in dexseq_count.py
Hello everyone,
I am using the DEXseq library in R. To get the read counts per exon, I used the script dexseq_count.py. When executing...
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Too many singleton alignments found by bwa
I was using bwa to map the high coverage paired-end sequenced trio data from 1000 genome. I found that singleton alignments (one end map, the other not...
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How can I remove singletons from a *.bam-file?
I want to remove singletons from a bam-file.
This is for paired-end data but I'm also fine with a method that only works on single-end...
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Re-assembly of singletons?
Hi, all
I have 454 transcriptome data, and I am a bit puzzled by some assemblies I have been doing. When I did a first assembly (on CLC...