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What you can explore with non-coding RNA data
Many of the non-coding RNAs (ncRNAs) produced by eukaryotic cells have been demonstrated to have crucial roles in biological processes. Long non-coding...
Last edited by Novogene; 05-28-2024, 11:45 AM.
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Webinar: Learn how one researcher analyzed piRNAs from 7,000 TCGA samples
Unique somatic and malignant expression patterns implicate PIWI-interacting RNAs in cancer-type specific biology
April 20, 2017
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viral small RNA that is NOT siRNA
Hi all, while looking for SNPs for virus quasispecies in a badnavirus using RNA that was gel-excised with maximum length of 100, maybe 200 bp I find definitive...
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human snoRNA atlas from small RNA sequencing data using snoSeeker
Dear All,
We identified 857 novel snoRNAs, as well as 1032 known snoRNAs from 370 million sequence reads generated by 237 small RNA sequencing...Last edited by yjhua2110; 01-26-2016, 08:57 PM.
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HiSeq4000 small RNA libraries (vs 2500)
Hi All,
I'm having some issues running a custom small RNA sequencing protocol on the HiSeq4000, when the same library works perfectly fine...
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Small RNA Library Sequencing on NextSeq
Does anyone have experience sequencing small RNA libraries on the NextSeq? We are consistently getting low cluster densities (140-150K/mm2) even with...
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Low miRNA count - small RNA NGS
Hello to All,
I am a newcomer in this area and recently we initiated one small RNA NGS project to study the differential expression of miRNA in...
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Small RNA sequencing problem
Hello everybody.
We have a problem with Illumina sequencing of miRNA contained in mouse serum. It is the first time we prepare a small RNA library,...
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piRNAs sequence files in fasta format for rat and mapping small RNA seq reads
I would like to search in my small-rna sequence set for pirnas and mirna. I managed to quantify the mirnas from the small-rna sequences.
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pre-small RNA library prep
I am attempting to prep a small rna library and have heard of people selecting for the small rna prior to introduction into protocols. I was wondering...
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Mapping and counting, small RNA seq. GA IIX
Hi all!
The size of my sequences are between 17-68 pb and I would like to align them to the genome with bowtie or bwa. Indeed, these sequences...
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Sequence for directional mRNA seq adaptors?
I am looking for the sequences of the sRNA3', sRNA 5', and SRA Rt primer mentioned in the Illumina Directional mRNA seq adaptor. These sequences are...
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small RNA from MAQC RNA samples?
Does anyone know where I can get access to small RNA/miRNA datasets from the Human Brain Reference RNA (Ambion) and the Universal Human Reference RNA...
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Improved Illumina-compatible Small RNA Sequencing
Hi,
I wanted to let you know that Bioo Scientific just launched the patent pending AIR™ Small RNA Sequencing Kit for preparation of Illumina-compatible...Last edited by Bioo Scientific; 09-24-2010, 10:53 AM.