Hi all,
our collaborators would like to perform an RNAseq experiment from a 2-cell co-culture system.
For this experiment...
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RNA-Seq on 2-cell co-culture system
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Snp
Why every mismatch is not SNP(single nucleotide polymorphism) in query genome sequence w.r.t reference genome?
If u know the...
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SNPs confusion?
I have four samples from diff animals. I used the novo snp to do the snp analysis.
First time, I put all the sample data together and do...
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Bioinformatics newbie question on geneious
I make use of the innder-built toll from Geneious Pro 5.4. to do SNP detect. The dataset I get are seperated into two parts FWD and REV. I drag and drop...
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Detecting SNPs, SNVs using CLC genomics wqorkbench
Hi everyone!
I am quite new to this field, and as such have a lot of questions but I don't know how to frame it...so please excuse me as...
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How to call variants from a whole genome alignment file
Hi All
I have a quick question about calling SNP/InDel from a whole genome alignment file which is in FASTA format. I have aligned 45 assembled...
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SNP detection CLC Bio
Hi everyone,
I found in the literature that when you do SNP detection in human exome data, you expect approximately 20,000 SNPs
...
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Webinar on How to Find SNPs
Free Webinar on How to Find SNPs
SNP verification and prioritization is one of the most time consuming tasks in variant analysis. The workflows...