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Soapdenovo trans
A) After assembling scaffolds from the trimmed and quality filter reads, I am getting the following ratio Average_number_of_contigs_per_scaffold :-1.0... -
Fastx and Soapdenovo trans
Hello,
I have filtered my illumina pair-end reads (Forward lib-24 million reads, Reverse Lib 24 million) using FASTX_Quality_Filter by... -
SOAPDenovo-Trans Error - Abored (Core Dumped)
Hello,
I am trying to de novo assemble a small SOLiD file with SOAPDenovo-Trans but I get the following error:
./SOAPdenovo-Trans-31kmer... -
SOAPdenovo-Trans and IDBA-Tran for transcriptome assembly
I was wondering if any users have experience using SOAPdenovo-Trans and/or IDBA-Tran for transcriptome assembly.
I have had reasonable...
