Advance your research. Understand RNA-Seq analyses challenges and solve them yourself.
When? Dec 8-11, 2025
Where? Berlin, Germany...
5 results in 0.0024 seconds.
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Only 8 seats left - 1st Berlin Winter School in RNA-Seq Data Analysis (Dec 8-11, 2025)
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Junctions.bed file in hisat2?
Hi,
I was wondering if there is a way I can generate junctions.bed file from hisat2 just like the one in tophat.
Hisat2 documentation... -
Getting level of spliced genes from gff-file
Hi,
I have a list of genes and I want to check how many of them are spliced, i.e. have multiple exons. Many of these genes also exist in... -
Tophat result: how to get the number for novel junctions
hi,
tophat can output a file junctions.bed including the splicing sites for junction reads.
Can I get novel splicing sites that... -
Alternative Splicing isoform Annotation
Hello
I am trying to identify differential alternative splicing events across two conditions. Now I plan to use MISO. This package requires...
