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JonB started a topic Need advice on analysing RNA-seq time series

in Bioinformatics

07-10-2014, 08:27 AM
Need advice on analysing RNA-seq time series

Hi everyone,

I have performed RNA-seq from different stages of embryogenesis. Some stages have two, three or four replicates, while some...

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evanharrell started a topic dosage analysis

in Bioinformatics

12-03-2013, 06:31 AM
dosage analysis

Hi everyone,

I designed an experiment looking at differential expression in a certain group of cells after overexpression of a gene in...

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anandksrao started a topic Data filters at what stage of NGS data analysis?

in Bioinformatics

10-08-2012, 10:27 AM
Data filters at what stage of NGS data analysis?

Greetings friends!

I seek help with data that I have : 3 time points, 3 genotypes, 3 replicates for each of these = 27 libraries
...

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john_nl started a topic Analyzing expression time course with DESeq

in Bioinformatics

02-22-2012, 06:37 AM
Analyzing expression time course with DESeq

Hello,

I have 11 samples covering 10 time points. Time point 1 has a control sample and a treated sample. The following 9 time points are...

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