Hello there
I am trying to create a custom database for BLAST to run a local BLAST with some of my own proetin sequences.
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6 results in 0.0027 seconds.
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Error with makeblastdb from UniProt fasta file: no sequences were found
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Uniprot IDs for a whole genome
Hallo,
I have extracted a population bin from a metagenome. I have also uploaded the same to the genebank. But according to their rule... -
Selecting the best database for blasting
Dear colleagues,
I recently asked a laboratory how they extended annotations on a transcriptome for a non-model organism; they pointed... -
BLASTing masssive protein sequences
Hi,
I have a transcriptome which consists of 38,000 protein sequences. Is it possible to BLAST all of them and find othologs and of these... -
Download fasta file for pdb id from uniprot
Hi Members,
I've a list of pdb id [some ~80].
I want to download their fasta file from Uniprot.
I have been unable to find... -
Mapping SNPs to proteins
I would like to convert SNP positions to Amino Acid positions in the current UniProt database. My goal is to determine if SNPS are in specific annotated...
