Hi !
I am pretty new at this ...
I have a merged bam file of about 100 patients mirna's and I would like to run an analysis to determine whether there are mirna's the have higher expression than others...
I've heard about Degseq, EdgeR and cufdiff but since I am not familiar with expression analysis I am not sure what is best for me to use.
Can someone suggest some kind of pipeline of working with bam files in order to determine the expression?
Thanks!
I am pretty new at this ...
I have a merged bam file of about 100 patients mirna's and I would like to run an analysis to determine whether there are mirna's the have higher expression than others...
I've heard about Degseq, EdgeR and cufdiff but since I am not familiar with expression analysis I am not sure what is best for me to use.
Can someone suggest some kind of pipeline of working with bam files in order to determine the expression?
Thanks!
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