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  • Annotating FASTA sequence

    Hi,

    Could anybody kindly let me know how to annotate a chicken FASTA sequence using UCSC annotation tracks?

    Thanks in advance

  • #2
    Wouldn't it be easier to just download their annotation files, or am I misunderstanding?

    Comment


    • #3
      I have downloaded the annotation tracks.

      Now, the point is you have to annotate my input FASTA file with the information from the annotation tracks.

      Do you have any other ideas?

      Comment


      • #4
        IGV should give you something similar.

        It doesn't quite annotate the genome, but it will give you corresponding information where annotation information is available on a different track.

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