Hello,
when I tried to run plink with option --file, it always gave me an error message, for example,
plink --file mydata.vcf
I expected mydata.ped and mydata.map were generated, instead of that, it gave me an error message as below.
@----------------------------------------------------------@
| PLINK! | v1.07 | 10/Aug/2009 |
|----------------------------------------------------------|
| (C) 2009 Shaun Purcell, GNU General Public License, v2 |
|----------------------------------------------------------|
| For documentation, citation & bug-report instructions: |
| http://pngu.mgh.harvard.edu/purcell/plink/ |
@----------------------------------------------------------@
Web-based version check ( --noweb to skip )
Recent cached web-check found...Problem connecting to web
Writing this text to log file [ plink.log ]
Analysis started: Sun Jan 8 21:48:40 2012
Options in effect:
--file mydata.vcf
ERROR: No file [ mydata.vcf.ped ] exists.
Anyone knows what's wrong with my command?
Thanks a lot.
when I tried to run plink with option --file, it always gave me an error message, for example,
plink --file mydata.vcf
I expected mydata.ped and mydata.map were generated, instead of that, it gave me an error message as below.
@----------------------------------------------------------@
| PLINK! | v1.07 | 10/Aug/2009 |
|----------------------------------------------------------|
| (C) 2009 Shaun Purcell, GNU General Public License, v2 |
|----------------------------------------------------------|
| For documentation, citation & bug-report instructions: |
| http://pngu.mgh.harvard.edu/purcell/plink/ |
@----------------------------------------------------------@
Web-based version check ( --noweb to skip )
Recent cached web-check found...Problem connecting to web
Writing this text to log file [ plink.log ]
Analysis started: Sun Jan 8 21:48:40 2012
Options in effect:
--file mydata.vcf
ERROR: No file [ mydata.vcf.ped ] exists.
Anyone knows what's wrong with my command?
Thanks a lot.
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