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  • jjjscuedu
    started a topic BWA compile error

    BWA compile error

    Hi all,

    When I compile the BWA-0.5.7, there is an error about it. However, I don't know where is wrong?

    Hence, can anyone give me some tips about it?

    Thanks!

    Jingjing

    jingjing@ubuntu:~/BWA$ cd bwa-0.5.7/
    jingjing@ubuntu:~/BWA/bwa-0.5.7$ make
    make[1]: Entering directory `/home/jingjing/BWA/bwa-0.5.7'
    make[1]: Nothing to be done for `lib'.
    make[1]: Leaving directory `/home/jingjing/BWA/bwa-0.5.7'
    make[1]: Entering directory `/home/jingjing/BWA/bwa-0.5.7/bwt_gen'
    gcc -c -g -Wall -O2 -m64 -DHAVE_PTHREAD bwt_gen.c -o bwt_gen.o
    In file included from /usr/include/features.h:387,
    from /usr/include/stdio.h:28,
    from bwt_gen.c:25:
    /usr/include/gnu/stubs.h:9: fatal error: gnu/stubs-64.h: No such file or directory
    compilation terminated.
    make[1]: *** [bwt_gen.o] Error 1
    make[1]: Leaving directory `/home/jingjing/BWA/bwa-0.5.7/bwt_gen'
    make: *** [lib-recur] Error 1

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