Hi everyone,
We have developed a new tool, lobSTR for profiling short tandem repeats from whole genome sequencing datasets. The tool takes in raw reads in FASTA/FASTQ or BAM format and reports genotypes at hundreds of thousands of STR markers.
You can download the tool and find complete usage instructions at our website (http://jura.wi.mit.edu/erlich/lobSTR/index.html).
We would love for people to try it out. Feel free to contact me ([email protected]) with any feedback or questions.
Thanks!
Melissa
We have developed a new tool, lobSTR for profiling short tandem repeats from whole genome sequencing datasets. The tool takes in raw reads in FASTA/FASTQ or BAM format and reports genotypes at hundreds of thousands of STR markers.
You can download the tool and find complete usage instructions at our website (http://jura.wi.mit.edu/erlich/lobSTR/index.html).
We would love for people to try it out. Feel free to contact me ([email protected]) with any feedback or questions.
Thanks!
Melissa
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