Hello everyone:
when I use the tgicl, I encounter a problem :
"Process terminated with an error, at step 'Initialization'! "
my command line is : ./tgicl -F ~/tmp/test.fa
The error in file err_tgicl_test.fa.log as follows:
>>> --- Initialization [/home/zhuy/tmp/test.fa] started at Apr 24 13:52:54 2012
tgicl.nozmsort.pl running options:
tgicl.nozmsort.pl /home/zhuy/tmp/test.fa
Standard log file: tgicl_test.fa.log
Error log file: err_tgicl_test.fa.log
Using 1 CPUs for clustering and assembly
Path is : /home/zhuy/bin/RNA/denovo_2.0/tgicl/bin:/home/zhuy/bin/RNA/denovo_2.0/tgicl:/home/zhuy/local/perl/bin:/home/zhouzh/lib/jdk1.6.0_23/bin:/home/zhuy/
-= Rebuilding /home/zhuy/tmp/test.fa indices =-
Error at cdbfasta /home/zhuy/tmp/test.fa
Process terminated with an error, at step 'Initialization'!
tgicl.nozmsort.pl (/home/zhuy/tmp/test.fa) encountered an error at step Initialization
Working directory was /home/zhuy/bin/RNA/denovo_2.0/tgicl.
Thank you !
when I use the tgicl, I encounter a problem :
"Process terminated with an error, at step 'Initialization'! "
my command line is : ./tgicl -F ~/tmp/test.fa
The error in file err_tgicl_test.fa.log as follows:
>>> --- Initialization [/home/zhuy/tmp/test.fa] started at Apr 24 13:52:54 2012
tgicl.nozmsort.pl running options:
tgicl.nozmsort.pl /home/zhuy/tmp/test.fa
Standard log file: tgicl_test.fa.log
Error log file: err_tgicl_test.fa.log
Using 1 CPUs for clustering and assembly
Path is : /home/zhuy/bin/RNA/denovo_2.0/tgicl/bin:/home/zhuy/bin/RNA/denovo_2.0/tgicl:/home/zhuy/local/perl/bin:/home/zhouzh/lib/jdk1.6.0_23/bin:/home/zhuy/
-= Rebuilding /home/zhuy/tmp/test.fa indices =-
Error at cdbfasta /home/zhuy/tmp/test.fa
Process terminated with an error, at step 'Initialization'!
tgicl.nozmsort.pl (/home/zhuy/tmp/test.fa) encountered an error at step Initialization
Working directory was /home/zhuy/bin/RNA/denovo_2.0/tgicl.
Thank you !
Comment