Does anyone have any experience with metagenomics? I will be interested to hear what gene prediction tools that are used and also if you try to assemble your sequence data prior to submitting to the tools. Is it better to try and assemble the sequences into bigger contigs or does this introduce cross species errors? Any advice or information will be much appreciated.
There is so much stuff out there I just do not know what to use!!
![Confused](https://www.seqanswers.com/core/images/smilies/confused.png)