Hi everyone,
I have .bam files in which the chromosomes are notated as '1', '2', '3', ... 'X', 'Y'.
However, for further analyses I need a .bam file in which the chromosomes are notated as 'chr1', 'chr2', 'chr3', ... 'chrX'. Does someone know a way to do this?
I thought I might need the substitute (s) command ...
I have .bam files in which the chromosomes are notated as '1', '2', '3', ... 'X', 'Y'.
However, for further analyses I need a .bam file in which the chromosomes are notated as 'chr1', 'chr2', 'chr3', ... 'chrX'. Does someone know a way to do this?
I thought I might need the substitute (s) command ...
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