Hello everybody,
During a RNA-seq experiment analysis I've receiver the request of getting the Transcription factors (TF) associated to the names of the Differentially expressed (DE) genes. I've been trying to fin a tool or R-package to achieve this, but I can't seem to find one.
I also looked in this forum to see if I could get any help, but the only post I came across was the following one.
I tried the solution there, but after crossing my DE table with the one mentioned in the post the result was almost useless (only 4 transcription factors seemed to be related with my DE list).
Briefly, Can anybody shed some light on this issue?
Thanks in advance
JL
During a RNA-seq experiment analysis I've receiver the request of getting the Transcription factors (TF) associated to the names of the Differentially expressed (DE) genes. I've been trying to fin a tool or R-package to achieve this, but I can't seem to find one.
I also looked in this forum to see if I could get any help, but the only post I came across was the following one.
I tried the solution there, but after crossing my DE table with the one mentioned in the post the result was almost useless (only 4 transcription factors seemed to be related with my DE list).
Briefly, Can anybody shed some light on this issue?
Thanks in advance
JL
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