Hi,
I have RNA-seq data from the coffee plant. The dataset have a specific fungi contamination.
I was looking for some good software that will take the dataset and separate the information from the plant and the fungi.
Can i use blast for this?
I need both information, that's why i can't use a simple tool for contamination.
any sugestions?
many thanks.
(Sorry for my english )
I have RNA-seq data from the coffee plant. The dataset have a specific fungi contamination.
I was looking for some good software that will take the dataset and separate the information from the plant and the fungi.
Can i use blast for this?
I need both information, that's why i can't use a simple tool for contamination.
any sugestions?
many thanks.
(Sorry for my english )