As above:
Is Picards MarkDuplicates safe to run on a multisample/multilibrary bam, or will it remove all reads that map to the same position even if they belong to different Samples?
Thanks
Is Picards MarkDuplicates safe to run on a multisample/multilibrary bam, or will it remove all reads that map to the same position even if they belong to different Samples?
Thanks