Hi,
I have one quick question on the SOAPdenovo parameter set up.
If I have paired-end reads (2*75bp) from 300 bp fragments, then should I set the parameter "avg_ins" to 300 or 150 (300 - 2*75)?
Thanks.
I have one quick question on the SOAPdenovo parameter set up.
If I have paired-end reads (2*75bp) from 300 bp fragments, then should I set the parameter "avg_ins" to 300 or 150 (300 - 2*75)?
Thanks.