Hi there,
I am now working on a project of CNV analysis of exome sequencing data. By using exomeCNV, so far I obtained DepthOfCoverage files by GATK for all 8 samples.
The problems are:
1. The 8 samples all 8 cases, no paired controls available.
2. If I use one as control and all others as cases, by using classify.eCNV I can get the results of one comparison. How can I combine the results of all comparison into one?
Thanks!
sht41
I am now working on a project of CNV analysis of exome sequencing data. By using exomeCNV, so far I obtained DepthOfCoverage files by GATK for all 8 samples.
The problems are:
1. The 8 samples all 8 cases, no paired controls available.
2. If I use one as control and all others as cases, by using classify.eCNV I can get the results of one comparison. How can I combine the results of all comparison into one?
Thanks!
sht41
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