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  • #1

    cufflinks - how to find how many splicing differences in one sample

    Hi: apologies if I am asking the same question in a different way!

    I want to identify how many splicing differences do I see in one sample. How can I do that from cufflinks - cuffdiff output.
    I have 3 samples with replicates. I am interested in sample 1 splicing differences.

    Has anyone tried? Could you please shave how you did it.

    thanks
    Adrian.
    Tags: None
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