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  • vcf to ped conversion

    I'm trying to convert vcf files to ped files, but I get a weird error.

    I execute:
    Code:
    vcftools --gzvcf chr23.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.EUR.nosingles.vcf.gz --chr X --plink --out chr23
    And I get the following error:
    Code:
    Using zlib version: 1.2.3
    Versions of zlib >= 1.2.4 will be *much* faster when reading zipped VCF files.
    Reading Index file.
    File contains 406938 entries and 379 individuals.
    Filtering by chromosome.
    terminate called after throwing an instance of 'std::bad_alloc'
      what():  St9bad_alloc
    Aborted
    Has anyone ever seen this error? How can I convert my file to ped format?

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