-- SOLVED -- bedtools intersect
hello,
does someone know a script which filters a gtf-file with coordinates from a bed file.
i have a bed-file with regions and want filter out all features from a gtf file which overlap (completely or largely) with this regions. is there a script or program? bedtools intersect does not work?
i know, an awk-script would not be very difficult, but why re-invent the wheel...
thank you,
dietmar
hello,
does someone know a script which filters a gtf-file with coordinates from a bed file.
i have a bed-file with regions and want filter out all features from a gtf file which overlap (completely or largely) with this regions. is there a script or program? bedtools intersect does not work?
i know, an awk-script would not be very difficult, but why re-invent the wheel...
thank you,
dietmar
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