Im trying to learn the basic bioinformatic analysis.
Now I have a little bit of idea how to get the variants using GATK.
By reading literatures, I have found a tool called merlin for pedigree analysis.
I really want to try this tool, but can't figure out how to convert vcf to merlin input formats (.ped, .dat, .map)
Can somebody help me to generate .ped .dat .map file from vcf?
Now I have a little bit of idea how to get the variants using GATK.
By reading literatures, I have found a tool called merlin for pedigree analysis.
I really want to try this tool, but can't figure out how to convert vcf to merlin input formats (.ped, .dat, .map)
Can somebody help me to generate .ped .dat .map file from vcf?
