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Ooops, my mistake. I did not read well the message. This swissregulon site seems good enough for TFBS in any case!
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hello,
thank you for your reply. I'm working with genes and elm is for proteins. I've looked again in the link i posted above and i think swissregulon is what i need. (or an older free version of transfaq)
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Hi,
I am not sure but this might be helpful to you:
Eukaryotic linear motif database.
Let me know if you have found something better.
cheers.
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Database with binding sites
Hello, i am looking for a database on a project i am working on. I need to find a database in which you search for a gene (by name or ID, or by giving the sequence as a query) and shows results about different binding sites on the gene (for promoters, transcription factors etc.). Something like Genbank, but the results should provide information about binding sites on the sequence. I found Matinspector, but i need a database as well. I've checked this thread:
Code:http://seqanswers.com/forums/showthread.php?t=27484
Thank you in advance!Tags: None
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The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...-
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