Hi
I was wondering is there any application that could be used to generate a .gct file without having the .cel file.
Currently, I am using http://www.genomespace.org/ , it basically combines a bunch of great tools together for the user to use.
This workflow: http://www.genomespace.org/support/g...ess-to-gitools
Unfortunately, the data set that I am working with does not have a .cel nor the raw data available.
The zip file does contained a few text files with tabbed gene expression. I was wondering if it was a way to use that to generate gene expression data that I could possibly use or even combine with the cufflinks expression that I have without using cummRbund as I am not too proficient with R just yet. Or if there a very dummy guide to use CummRbund with R and how to use everything
Thank you everyone.
Thank you,
Zain
I was wondering is there any application that could be used to generate a .gct file without having the .cel file.
Currently, I am using http://www.genomespace.org/ , it basically combines a bunch of great tools together for the user to use.
This workflow: http://www.genomespace.org/support/g...ess-to-gitools
Unfortunately, the data set that I am working with does not have a .cel nor the raw data available.
The zip file does contained a few text files with tabbed gene expression. I was wondering if it was a way to use that to generate gene expression data that I could possibly use or even combine with the cufflinks expression that I have without using cummRbund as I am not too proficient with R just yet. Or if there a very dummy guide to use CummRbund with R and how to use everything
Thank you everyone.
Thank you,
Zain
