Hello everybody,
I camming from "bowtie world" and illumina sequencing...
but now I'm received a ion proton library and I want mapp that reads in a reference genome... I've found that TMAP tool is a better tool than bowtie and soap for ion proton reads...
I've no success in using the mapall algorithm
when I trying a error happens in "tmap_map_opt_check"
probably, there are some options that weren't used... but which one??
the manual didn't show any usefull information about that...
does anybody have a template for tmap mapall default commands?
like:
tmap mapall -f reference.fas -r lib.fastq -s out.sam etc.....
thanks
I camming from "bowtie world" and illumina sequencing...
but now I'm received a ion proton library and I want mapp that reads in a reference genome... I've found that TMAP tool is a better tool than bowtie and soap for ion proton reads...
I've no success in using the mapall algorithm
when I trying a error happens in "tmap_map_opt_check"
probably, there are some options that weren't used... but which one??
the manual didn't show any usefull information about that...
does anybody have a template for tmap mapall default commands?
like:
tmap mapall -f reference.fas -r lib.fastq -s out.sam etc.....
thanks
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