Hi,
I'm new to RNA-seq analysis. I have biological duplicates of 4 different conditions. I want to check how good the replicates are for each condition. I have got them mapped to the genome and have run cuffdiff on the files, but I was wondering what comparisons people do/tools people use to check their replicates?
Thanks
I'm new to RNA-seq analysis. I have biological duplicates of 4 different conditions. I want to check how good the replicates are for each condition. I have got them mapped to the genome and have run cuffdiff on the files, but I was wondering what comparisons people do/tools people use to check their replicates?
Thanks
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