Hello All,
I am going to receive data from a MiSeq run consisting of 300 multiplexed small amplicons in a week or so. This will be my first time analyzing NextGeneration sequencing data, so I am trying to learn how to use some of the necessary programs now. Specifically, I will be using FLASH, FastQC, PrinSeq, and jMHC.
Does anyone know of any sample datasets that I can access online in order to start playing around with these programs? Ideally, the dataset would consist of a bunch of multiplexed samples with 150bp paired end reads. Thanks.
I am going to receive data from a MiSeq run consisting of 300 multiplexed small amplicons in a week or so. This will be my first time analyzing NextGeneration sequencing data, so I am trying to learn how to use some of the necessary programs now. Specifically, I will be using FLASH, FastQC, PrinSeq, and jMHC.
Does anyone know of any sample datasets that I can access online in order to start playing around with these programs? Ideally, the dataset would consist of a bunch of multiplexed samples with 150bp paired end reads. Thanks.
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