hello guys,
I just noticed that ERANGE is a very powerful tool for analyzing RNA-seq data. It computes RPKMs for genes from unique, multiple and splice reads, and it also can identify cluseters of reads not belonging to any gene model. However, I still wondering whether it can identify novel (beyond the gene/exon annotation) splice junctions.
Any comment is appreciated!
I just noticed that ERANGE is a very powerful tool for analyzing RNA-seq data. It computes RPKMs for genes from unique, multiple and splice reads, and it also can identify cluseters of reads not belonging to any gene model. However, I still wondering whether it can identify novel (beyond the gene/exon annotation) splice junctions.
Any comment is appreciated!
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