could not locate bowtie index corresponding to biobase "e_coli"
Hi,
I am trying to use bowtie from my environmental variable-
$ Module load bio/bowtie/1.1.2
$ bowtie e_coli reads/e_coli_1000.fq
But it returns me the following:
Could not locate a Bowtie index corresponding to basename "e_coli"
Command: bowtie --wrapper basic-0 e_coli reads/e_coli_1000.fq
I thought e_coli indices comes with the package - so this this should be a easy command to run.
Could someone guide me about what is the right command?
Hi,
I am trying to use bowtie from my environmental variable-
$ Module load bio/bowtie/1.1.2
$ bowtie e_coli reads/e_coli_1000.fq
But it returns me the following:
Could not locate a Bowtie index corresponding to basename "e_coli"
Command: bowtie --wrapper basic-0 e_coli reads/e_coli_1000.fq
I thought e_coli indices comes with the package - so this this should be a easy command to run.
Could someone guide me about what is the right command?
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