I am new to this.
Running
tabix -h ftp://ftp.1000genomes.ebi.ac.uk/vol1...notypes.vcf.gz 2:39967768-39967768
get a error:
[E::hts_open_format] Failed to open file "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20100804/ALL.2of4intersection.20100804.genotypes.vcf.gz" : Protocol not supported
Could not open "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20100804/ALL.2of4intersection.20100804.genotypes.vcf.gz": Protocol not supported
But, wget the file and tbi file
wget ftp://ftp.1000genomes.ebi.ac.uk/vol1...notypes.vcf.gz
wget ftp://ftp.1000genomes.ebi.ac.uk/vol1...pes.vcf.gz.tbi
and
tabix -h ALL.2of4intersection.20100804.genotypes.vcf.gz 2:39967768-39967768
it works.
What's wrong i have made to tabix with the remote file?
Thanks!!!
Running
tabix -h ftp://ftp.1000genomes.ebi.ac.uk/vol1...notypes.vcf.gz 2:39967768-39967768
get a error:
[E::hts_open_format] Failed to open file "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20100804/ALL.2of4intersection.20100804.genotypes.vcf.gz" : Protocol not supported
Could not open "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20100804/ALL.2of4intersection.20100804.genotypes.vcf.gz": Protocol not supported
But, wget the file and tbi file
wget ftp://ftp.1000genomes.ebi.ac.uk/vol1...notypes.vcf.gz
wget ftp://ftp.1000genomes.ebi.ac.uk/vol1...pes.vcf.gz.tbi
and
tabix -h ALL.2of4intersection.20100804.genotypes.vcf.gz 2:39967768-39967768
it works.
What's wrong i have made to tabix with the remote file?
Thanks!!!