Hi
I have cDNA reads obtained by 454 GS FLX Titanium sequencer and I'd like to map them on a reference genome using ssahaEST.
Which values are the optimal for this case considering the size of the reads and the fact that in this case, the organism don't have alternative splicing?
Thanks
I have cDNA reads obtained by 454 GS FLX Titanium sequencer and I'd like to map them on a reference genome using ssahaEST.
Which values are the optimal for this case considering the size of the reads and the fact that in this case, the organism don't have alternative splicing?
Thanks