Dear all,
I'm interested in saving multi-reads from maq output and can't figure out the details.
Whling running maq command,
I used an option -H to store multiple hits into a seperate file, like
'maq maq all. map reference.bfa read.bfq -H multi.map'
but can't open multi.map file now..
Does anyone knows how to read multi.map, or alternative way to check multi-reads?
Thanks a lot!
Cheers,
I'm interested in saving multi-reads from maq output and can't figure out the details.
Whling running maq command,
I used an option -H to store multiple hits into a seperate file, like
'maq maq all. map reference.bfa read.bfq -H multi.map'
but can't open multi.map file now..
Does anyone knows how to read multi.map, or alternative way to check multi-reads?
Thanks a lot!
Cheers,